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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tspyl4, TSPY-like 4
Sequence ID:NM_030203
Entrez Gene ID:72480
Ensembl ID:ENSMUSG00000039485

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B1|10 22.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 34297510 - 34298028

NM_030203 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
139003401722634021125

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4511620Full LengthBC017540TSPY-like 4
4527889Full LengthBC030922TSPY-like 4
5361000Full LengthBC034656TSPY-like 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084479  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030203 NP_084479 Q8VD63 NAP

Related Sequences

 
mRNAGenPeptSwissProt
BC017540 AAH17540 Q8VD63
BC030922 AAH30922 Q8K0N1
BC034656 AAH34656 Q8VD63
AK030740 BAC27108 Q8VD63
AK034070 BAC28571 Q8BZN5
AK034414 BAC28701 Q8BZJ5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tspyl4 NP_084479 R.norvegicus Tspyl4 309828   NP_001012075 91
H.sapiens TSPYL4 23270 Gene Info NP_067680 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)