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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pja2, Praja 2, RING-H2 motif containing
Sequence ID:NM_001025309
NM_144859
Entrez Gene ID:224938
Ensembl ID:ENSMUSG00000024083

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 E1.1|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 64281020 - 64331916

 Exon Info From UCSC:
NM_001025309
NM_144859

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4506259Full LengthBC017130praja 2, RING-H2 motif containing
3499845IncompleteBC004742praja 2, RING-H2 motif containing
5036061IncompleteBC043340praja 2, RING-H2 motif containing
40044256IncompleteBC119446praja 2, RING-H2 motif containing

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_659108  NP_001020480  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025309 NP_001020480 Q80U04 zf-C3HC4
NM_144859 NP_659108   zf-C3HC4

Related Sequences

 
mRNAGenPeptSwissProt
BC004742 AAH04742 Q80U04
BC017130 AAH17130 Q80U04
BC119446 AAI19447 Q0VDX8
AF493070 AAO85470 Q80U04
AK122282 BAC65564 Q80U04
AK144586 BAE25949 Q80U04
AK168371 BAE40303 Q80U04

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pja2 NP_001020480 R.norvegicus Pja2 192256   NP_620251 92
H.sapiens PJA2 9867 Gene Info NP_055634 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)