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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chn1, chimerin (chimaerin) 1
Sequence ID:NM_001113246
NM_001166603
NM_001166604
NM_029716
NM_175752
Entrez Gene ID:108699
Ensembl ID:ENSMUSG00000056486

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 73612908 - 73660247

 Exon Info From UCSC:
NM_001113246
NM_001166603
NM_001166604
NM_029716
NM_175752

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4219273Full LengthBC010825chimerin (chimaerin) 1
5360438Full LengthBC024796chimerin (chimaerin) 1
5364554Full LengthBC025023chimerin (chimaerin) 1
6415204Full LengthBC054770chimerin (chimaerin) 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083992  NP_786928  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001113246 NP_001106717 Q91V57  
NM_001166603 NP_001160075    
NM_001166604 NP_001160076    
NM_029716 NP_083992   RhoGAP
NM_175752 NP_786928   C1_1
RhoGAP

Related Sequences

 
mRNAGenPeptSwissProt
BC010825 AAH10825 Q91V57
BC024796 AAH24796 Q91V57
BC025023 AAH25023 Q91V57
BC054770 AAH54770 Q91V57
AF332069 AAK56097 Q91V57
AF332070 AAK56098 Q91V57
AK007182 BAB24888 Q91V57
AK049943 BAC33996 Q91V57
AK075606 BAC35853 Q91V57
AK147686 BAE28074 Q91V57
AB264771 BAF80061 A7VK12
AB264772 BAF80062 A7VK13
AB264774 BAF80063 A7VK14

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chn1 NP_001106717 H.sapiens CHN1 1123 Gene Info NP_001813 96
D.melanogaster RhoGAP5A 31473   NP_727007 45
A.gambiae AgaP_AGAP003026 1272926   XP_311850 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta