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Gene Info

Gene Information For:Mm. Atp6ap1, ATPase, H+ transporting, lysosomal accessory protein 1
Sequence ID:NM_018794
Entrez Gene ID:54411
Ensembl ID:ENSMUSG00000019087

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:X A7.3|X 29.83

Chromosomal Position (from UCSC)

Chromosomal Position:X: 74297178 - 74304138

NM_018794 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12257154243571542659
2263527154296171543087
3534277154558871545662
4286217154591671546109
6226627154666271546702
6637487154727471547359
7499877154770071547938
98810357154856071548607
103612647154869671548924
126521897154913571550059

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6493219Full LengthBC048241ATPase, H+ transporting, lysosomal accessory protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061264  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018794 NP_061264 Q9R1Q9
Q3TWN7
ATP-synt_S1

Related Sequences

 
mRNAGenPeptSwissProt
BC048241 AAH48241 Q9R1Q9
Q3TWN7
AY033882 AAK57548 Q8K567
AB031290 BAA83498 Q9R1Q9
Q3TWN7
AK220247 BAD90172 Q571E2
AK136210 BAE22877 Q3UWN7
AK150333 BAE29475 Q3UCY7
AK158956 BAE34740 Q9R1Q9
Q3TWN7
AK159612 BAE35229 Q9R1Q9
Q3TWN7
AK161631 BAE36502 Q3TT23
AK166793 BAE39022 Q3TKX1
AK168080 BAE40053 Q3THZ3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp6ap1 NP_061264 R.norvegicus Atp6ap1 83615   NP_113973 97
H.sapiens ATP6AP1 537 Gene Info NP_001174 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)