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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Brms1, breast cancer metastasis-suppressor 1
Sequence ID:NM_134155
Entrez Gene ID:107392
Ensembl ID:ENSMUSG00000080268

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 5041392 - 5049912

NM_134155 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18750414035041489
8823350458925046037
23432450461355046225
32545250463935046520
45353250466495046728
53362950468145046910
63072250473915047483
72378750485085048572
78882750489925049031
828133850494065049916

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2811430Full LengthBC003485breast cancer metastasis-suppressor 1
4921658Full LengthBC016108breast cancer metastasis-suppressor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598916  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134155 NP_598916 Q99N20
Q547N0
Sds3

Related Sequences

 
mRNAGenPeptSwissProt
BC003485 AAH03485 Q99LB1
BC016108 AAH16108 Q99N20
Q547N0
AF233580 AAK15007 Q99N20
Q547N0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Brms1 NP_598916 R.norvegicus Brms1 293668   NP_001009605 98
H.sapiens BRMS1 25855 Gene Info NP_001020128 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)