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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Hsd17b12, hydroxysteroid (17-beta) dehydrogenase 12
Sequence ID:NM_019657
Entrez Gene ID:56348
Ensembl ID:ENSMUSG00000027195

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 94033536 - 94157888

 Exon Info From UCSC:
NM_019657

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5375831Full LengthBC037620hydroxysteroid (17-beta) dehydrogenase 12
30675153Full LengthBC090659hydroxysteroid (17-beta) dehydrogenase 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062631  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_019657 NP_062631 O70503 EC 1.1.1.62 adh_short

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF064635 AAC16885 O70503 EC 1.1.1.62
BC037620 AAH37620 O70503 EC 1.1.1.62
BC090659 AAH90659 Q0VGQ1  
AK012103 BAB28034 Q9CSR6  
AK076088 BAC36174 Q8BPF1  
AK078841 BAC37418 O70503 EC 1.1.1.62
AK081869 BAC38354 O70503 EC 1.1.1.62
AK082715 BAC38583 O70503 EC 1.1.1.62
AK088521 BAC40401 O70503 EC 1.1.1.62
AK150849 BAE29906 O70503 EC 1.1.1.62
AK152489 BAE31260 O70503 EC 1.1.1.62
AK166027 BAE38530 O70503 EC 1.1.1.62
AK167908 BAE39915 O70503 EC 1.1.1.62

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hsd17b12 NP_062631 R.norvegicus Hsd17b12 84013   NP_114455 94
H.sapiens HSD17B12 51144 Gene Info NP_057226 81
D.melanogaster CG1444 31703   NP_572420 53
A.gambiae AgaP_AGAP004532 1274678   XP_313833 47
C.elegans let-767 175895   NP_498386 42
A.thaliana KCR1 843098   NP_564905 40
C.elegans stdh-3 182292   NP_506448 40
C.elegans stdh-2 184337   NP_507092 39
C.elegans stdh-4 184934   NP_505205 39
S.pombe SPAC4G9.15 2543099   NP_593697 39
C.elegans stdh-1 182291   NP_506449 38
N.crassa NCU11297 3873215   XP_957031 37
S.cerevisiae IFA38 852456   NP_009717 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)