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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Myl12a, myosin, light chain 12A, regulatory, non-sarcomeric
Sequence ID:NM_026064
Entrez Gene ID:67268
Ensembl ID:ENSMUSG00000024048

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 E1.3|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 70993655 - 71002222

NM_026064 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19927134313271344123
99311547134544971345610
115513537134603671346234
135417797135144771351872

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2599135Full LengthBC029180RIKEN cDNA 2900073G15 gene
3588394Full LengthBC010265RIKEN cDNA 2900073G15 gene
3711075IncompleteBC006719RIKEN cDNA 2900073G15 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080340  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026064 NP_080340 Q6ZWQ9 efhand

Related Sequences

 
mRNAGenPeptSwissProt
BC006719 AAH06719 Q922W7
BC010265 AAH10265 Q6ZWQ9
BC029180 AAH29180 Q6ZWQ9
AK013776 BAB28989 Q9D6E6
AK018348 BAB31172 Q9CXD2
AK028020 BAC25702 Q6ZWQ9
AK045160 BAC32243 Q6ZWQ9
AK151265 BAE30252 Q6ZWQ9
AK159151 BAE34858 Q6ZWQ9
AK167553 BAE39618 Q6ZWQ9
AK168016 BAE40003 Q6ZWQ9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Myl12a NP_080340 R.norvegicus RGD1309537 501203   NP_001128489 100
H.sapiens MYL12A 10627 Gene Info NP_006462 98
D.melanogaster sqh 31554   NP_511057 81
A.gambiae AgaP_AGAP000927 1270410   XP_309109 80
C.elegans mlc-4 175440   NP_497700 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)