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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rad50, RAD50 homolog (S. cerevisiae)
Sequence ID:NM_009012
Entrez Gene ID:19360
Ensembl ID:ENSMUSG00000020380

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A5-B1|11 28.9

Chromosomal Position (from UCSC)

Chromosomal Position:11: 53698226 - 53707316

 Exon Info From UCSC:
NM_009012

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068367Full LengthBC168398RAD50 homolog (S. cerevisiae)
5326164IncompleteBC058180RAD50 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033038  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009012 NP_033038 P70388 SMC_N
Rad50_zn_hook

Related Sequences

 
mRNAGenPeptSwissProt
U66887 AAC52894 P70388
BC002033 AAH02033 Q99M38
BC058180 AAH58180 P70388
BC168398 AAI68398  
AK018001 BAB31030 P70388
AK087982 BAC40074 P70388
AK132949 BAE21438 Q3V0R5
AK144155 BAE25735 Q3UNL2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rad50 NP_033038 R.norvegicus Rad50 64012   NP_071582 96
H.sapiens RAD50 10111 Gene Info NP_005723 92
A.gambiae AgaP_AGAP003676 1274350   XP_313457 32
D.melanogaster rad50 37564   NP_726199 32
A.thaliana RAD50 817756   NP_565733 32
S.cerevisiae RAD50 855471   NP_014149 30
S.pombe rad50 2541635   NP_594318 30
N.crassa NCU00901 3879967   XP_963818 29
P.falciparum PFF0285c 3885706   XP_966048 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta