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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rcn1, reticulocalbin 1
Sequence ID:NM_009037
Entrez Gene ID:19672
Ensembl ID:ENSMUSG00000005973

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E3|2 58.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 105386928 - 105399226

NM_009037 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12079105226104105228182
20802279105229133105229332
22802340105232126105232186
23412519105233745105233923
25202713105234835105235028
27143063105239126105239475

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6414128Full LengthBC049108reticulocalbin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033063  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009037 NP_033063 Q05186 efhand

Related Sequences

 
mRNAGenPeptSwissProt
BC049108 AAH49108 Q05186
D13003 BAA02366 Q05186
AK017494 BAB30773 Q05186
AK133971 BAE21962 Q05186
AK159973 BAE35525 Q05186

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rcn1 NP_033063 R.norvegicus Rcn1 362182   NP_001102056 99
H.sapiens RCN1 5954 Gene Info NP_002892 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)