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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nr1i3, nuclear receptor subfamily 1, group I, member 3
Sequence ID:NM_001243062
NM_001243063
NM_009803
Entrez Gene ID:12355
Ensembl ID:ENSMUSG00000005677

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H3|1 92.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 171214035 - 171218844

Transcript StartTranscript EndChromosomal Start Chromosomal End
1204173144100173144303
205347173144473173144615
348478173145074173145204
479648173146509173146678
649788173146876173147015
789934173147206173147351
9351051173147444173147560
10521157173147756173147861
11581413173148719173148974

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30315989Full LengthBC089541nuclear receptor subfamily 1, group I, member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033933  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243062 NP_001229991    
NM_001243063 NP_001229992    
NM_009803 NP_033933 O35627 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
AF009327 AAC53349 O35627
AF009328 AAC53350 O35627
BC037645 AAH37645 Q8CI30
BC089541 AAH89541 Q5FW96
AK133515 BAE21697 O35627
AK149430 BAE28870 Q3UEP1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nr1i3 NP_033933 R.norvegicus Nr1i3 65035   NP_075230 92
H.sapiens NR1I3 9970 Gene Info NP_001070950 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta