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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Acsm1, acyl-CoA synthetase medium-chain family member 1
Sequence ID:NM_054094
Entrez Gene ID:117147
Ensembl ID:ENSMUSG00000033533

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 F3

Chromosomal Position (from UCSC)

Chromosomal Position:7: 119617827 - 119662515

 Exon Info From UCSC:
NM_054094

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4238964Full LengthBC016414acyl-CoA synthetase medium-chain family member 1
5102652Full LengthBC022149acyl-CoA synthetase medium-chain family member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_473435  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_054094 NP_473435 Q91VA0 EC 6.2.1.2 AMP-binding

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC016414 AAH16414 Q91VA0 EC 6.2.1.2
BC022149 AAH22149 Q91VA0 EC 6.2.1.2
AB059428 BAB64534 Q91VA0 EC 6.2.1.2
AK149550 BAE28952 Q91VA0 EC 6.2.1.2
AK149586 BAE28977 Q91VA0 EC 6.2.1.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Acsm1 NP_473435 H.sapiens ACSM1 116285 Gene Info NP_443188 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta