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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pelo, pelota homolog (Drosophila)
Sequence ID:NM_134058
Entrez Gene ID:105083
Ensembl ID:ENSMUSG00000042275

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 D2.2|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 115088363 - 115090825

NM_134058 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17623115878562115879168
6241588115879401115880365

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5349483Full LengthBC057160pelota homolog (Drosophila)
6431710Full LengthBC050209pelota homolog (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598819  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134058 NP_598819 Q80X73 eRF1_1
eRF1_2
eRF1_3

Related Sequences

 
mRNAGenPeptSwissProt
BC050209 AAH50209 Q80X73
BC057160 AAH57160 Q80X73
AF148638 AAK58116 Q80X73
AK146382 BAE27128 Q3THL5
AK168228 BAE40181 Q3THL5
AK170635 BAE41926 Q80X73

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pelo NP_598819 R.norvegicus Pelo 294754   NP_001007635 99
H.sapiens PELO 53918 Gene Info NP_057030 97
A.gambiae AgaP_AGAP008269 1277715   XP_317201 68
D.melanogaster pelo 34286   NP_476982 67
C.elegans R74.6 187888   NP_497842 59
A.thaliana PEL1 828876   NP_194495 51
A.thaliana AT3G58390 825008   NP_191398 48
S.pombe SPCC18B5.06 2539371   NP_587936 48
N.crassa NCU09161 3875218   XP_959071 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)