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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. H2-Q6, Histocompatibility 2, Q region locus 6
Sequence ID:NM_023124
NM_207648
Entrez Gene ID:110557
Ensembl ID:ENSMUSG00000073409

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17 19.18

Chromosomal Position (from UCSC)

Chromosomal Position:17: 35429116 - 35430051

 Exon Info From UCSC:
NM_023124
NM_207648

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062215Full LengthBC156754histocompatibility 2, Q region locus 6
100015618BC148635histocompatibility 2, Q region locus 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075613  NP_997531  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023124 NP_075613 Q9CZ20 MHC_I
NM_207648 NP_997531 P79568 MHC_I
C1-set

Related Sequences

 
mRNAGenPeptSwissProt
BC148635 AAI48636  
BC156754 AAI56755  
XM_003085179 XP_003085227  
XM_003688944 XP_003688992  
XM_003946319 XP_003946368  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus H2-Q6 NP_997531 M.musculus H2-Q9 110558   XP_003085174 90
M.musculus H2-Gs10 436493   NP_001137161 83
M.musculus Gm10499 69717 Gene Info XP_003085179 82
M.musculus Gm8909 667977   NP_001074501 81
M.musculus H2-Bl 14963 Gene Info NP_032225 80
M.musculus H2-Q1 15006 Gene Info NP_034520 78
M.musculus H2-Q2 15013 Gene Info NP_034522 78
H.sapiens HLA-B 3106 Gene Info NP_005505 68