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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Alkbh1, alkB, alkylation repair homolog 1 (E. coli)
Sequence ID:NM_001102565
Entrez Gene ID:211064
Ensembl ID:ENSMUSG00000079036

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 D3|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 87433256 - 87443839

NM_001102565 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2112138876902788770219
121414078877234988772542
140814988877506888775158
149916618877934688779508
166217708878125588781363
177119688878459188784788

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001102565 NP_001096035    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Alkbh1 NP_001096035 R.norvegicus Alkbh 362766   NP_001102188 86
H.sapiens ALKBH1 8846 Gene Info NP_006011 83
A.gambiae AgaP_AGAP000155 1272107   XP_310984 41
D.melanogaster AlkB 2768870   NP_996458 36
C.elegans Y51H7C.5 190176   NP_493969 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)