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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rbm38, RNA binding motif protein 38
Sequence ID:NM_019547
Entrez Gene ID:56190
Ensembl ID:ENSMUSG00000027510

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 173021931 - 173034725

NM_019547 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1369172847402172847770
370493172848292172848415
494548172848827172848881
5491774172859006172860231

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6396103Full LengthBC085307RNA binding motif protein 38

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062420  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019547 NP_062420 Q62176 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC085307 AAH85307 Q62176
AK146026 BAE26841 Q62176
AK162141 BAE36749 Q62176
AK166609 BAE38891 Q3TLA1
AK172625 BAE43103 Q62176

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rbm38 NP_062420 H.sapiens RBM38 55544 Gene Info NP_059965 95
A.thaliana AT1G76460 843979   NP_565132 57
A.thaliana AT1G20880 838681   NP_564127 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)