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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atxn3, ataxin 3
Sequence ID:NM_001167914
NM_029705
Entrez Gene ID:110616
Ensembl ID:ENSMUSG00000021189

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 E|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 101923106 - 101958157

 Exon Info From UCSC:
NM_001167914
NM_029705

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6771498Full LengthBC087880ataxin 3
6772218IncompleteBC049743ataxin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083981  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001167914 NP_001161386      
NM_029705 NP_083981 Q9CVD2 EC 3.4.19.12 Josephin
UIM

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC049743 AAH49743 Q810M8  
BC087880 AAH87880 Q5M8S1  
AF537188 AAQ10750 Q9CVD2
Q546X9
EC 3.4.19.12
AK008675 BAB25825 Q9CVD2 EC 3.4.19.12
AK030842 BAC27155 Q9CVD2 EC 3.4.19.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atxn3 NP_083981 R.norvegicus Atxn3 60331   NP_067734 94
H.sapiens ATXN3 4287 Gene Info NP_004984 87
A.thaliana AT3G54130 824580   NP_190981 40
C.elegans atx-3 180049   NP_506873 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)