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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cntn2, contactin 2
Sequence ID:NM_011531
NM_177129
Entrez Gene ID:21367
Ensembl ID:ENSMUSG00000053024

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E4|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 132509424 - 132513242


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30362931Full LengthBC066106contactin 2
5697614IncompleteBC057075contactin 2
5704592IncompleteBC053033contactin 2
5706495IncompleteBC079585contactin 2
6856255IncompleteBC079602contactin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_796103  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177129 NP_796103 Q61330 fn3
ig
I-set

Related Sequences

 
mRNAGenPeptSwissProt
BC053033 AAH53033 Q61330
BC066106 AAH66106 Q61330
AK134878 BAE22323 Q3UY89
AK147602 BAE28018 Q3UH39
AK147673 BAE28065 Q3UGZ2
X81365 CAA57130 Q61330

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cntn2 NP_796103 R.norvegicus Cntn2 25356   NP_037016 96
H.sapiens CNTN2 6900 Gene Info NP_005067 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)