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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Npm1, nucleophosmin 1
Sequence ID:NM_001252260
NM_001252261
NM_008722
Entrez Gene ID:18148
Ensembl ID:ENSMUSG00000057113

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A4|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 33154926 - 33163077


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5710278Full LengthBC092378nucleophosmin 1
6411700Full LengthBC054755nucleophosmin 1
6820557Full LengthBC090843nucleophosmin 1
30438901Full LengthBC085278nucleophosmin 1
30505980Full LengthBC089546nucleophosmin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032748  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252260 NP_001239189    
NM_001252261 NP_001239190    
NM_008722 NP_032748 Q5SQB7
Q61937
Nucleoplasmin

Related Sequences

 
mRNAGenPeptSwissProt
M33212 AAA39801 Q5SQB7
Q61937
BC054755 AAH54755 Q5SQB7
Q61937
BC085278 AAH85278 Q5U438
BC089546 AAH89546 Q5SQB7
Q61937
BC090843 AAH90843 Q5BL09
BC092378 AAH92378 Q5SQB7
Q61937
GU214027 ADA57701 Q5SQB7
AK005420 BAB24014 Q9DAY9
AK028253 BAC25844 Q5SQB7
Q61937
AK028370 BAC25910 Q8BSZ3
AK088923 BAC40655 Q9DAY9
AK135517 BAE22562 Q5SQB7
Q61937
AK145124 BAE26248 Q5SQB7
Q61937
AK145813 BAE26667 Q5SQB7
Q61937
AK150164 BAE29354 Q3UDA7
AK153901 BAE32244 Q3U536
AK165860 BAE38420 Q5SQB7
Q61937

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Npm1 NP_032748 R.norvegicus Npm1 25498   NP_037124 99
H.sapiens NPM1 4869 Gene Info NP_002511 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)