Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chsy3, chondroitin sulfate synthase 3
Sequence ID:NM_001081328
Entrez Gene ID:78923
Ensembl ID:ENSMUSG00000058152

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 D3|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 59176352 - 59411308

NM_001081328 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
111455933499359336137
114614295933891859339201
143038825956853759570989

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9088053Full LengthBC151164chondroitin sulfate synthase 3
9088054Full LengthBC151165chondroitin sulfate synthase 3
9088141Full LengthBC157985chondroitin sulfate synthase 3

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001081328 NP_001074797 Q5DTK1 EC 2.4.1.226
EC 2.4.1.175
 

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC151164 AAI51165 Q5DTK1 EC 2.4.1.226
EC 2.4.1.175
BC151165 AAI51166 Q5DTK1 EC 2.4.1.226
EC 2.4.1.175
BC157985 AAI57986 Q5DTK1 EC 2.4.1.226
EC 2.4.1.175
AK019528 BAC25596 Q8CEL5  
AK043732 BAC31633 Q8BRQ5  
AK044099 BAC31776 Q8BRJ2  
AK220519 BAD90307 Q5DTK1 EC 2.4.1.226
EC 2.4.1.175

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chsy3 NP_001074797 R.norvegicus Chsy3 291577   XP_225912 96
H.sapiens CHSY3 337876 Gene Info NP_787052 91
C.elegans sqv-5 172851   NP_001021640 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)