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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Aqp9, aquaporin 9
Sequence ID:NM_001271843
NM_022026
NR_073483
Entrez Gene ID:64008
Ensembl ID:ENSMUSG00000032204

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 D|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 71112203 - 71163086

Transcript StartTranscript EndChromosomal Start Chromosomal End
117257095846770960191
172619437097059770970814
194420627097822770978345
206322007098042970980566
220123277098589470986020
232826447101077971011095

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5096952Full LengthBC024105aquaporin 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071309  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271843 NP_001258772    
NM_022026 NP_071309 Q9JJJ3
Q4FK77
MIP

Related Sequences

 
mRNAGenPeptSwissProt
BC024105 AAH24105 Q8R1T7
AB037180 BAB03271 Q9JJJ3
Q4FK77
AK050042 BAC34044 Q9JJJ3
Q4FK77
CT010174 CAJ18382 Q9JJJ3
Q4FK77

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aqp9 NP_071309 R.norvegicus Aqp9 65054   NP_075249 89
H.sapiens AQP9 366 Gene Info NP_066190 76
C.elegans aqp-3 190553   NP_502044 44
C.elegans aqp-2 174467   NP_495972 40
C.elegans aqp-7 180589   NP_508515 39
A.thaliana NIP7;1 819783   NP_566271 38
C.elegans aqp-1 174190   NP_871933 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)