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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Htr5b, 5-hydroxytryptamine (serotonin) receptor 5B
Sequence ID:NM_010483
Entrez Gene ID:15564
Ensembl ID:ENSMUSG00000050534

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E4-G|1 63.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 121510299 - 121528363

NM_010483 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16966123406349123407299
9672019123423989123425041

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40056204Full LengthBC1158255-hydroxytryptamine (serotonin) receptor 5B
40056207Full LengthBC1149885-hydroxytryptamine (serotonin) receptor 5B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034613  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010483 NP_034613 P31387 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC114988 AAI14989 P31387
BC115825 AAI15826 P31387
X69867 CAA49501 P31387

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Htr5b NP_034613 R.norvegicus Htr5b 79247   NP_077371 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)