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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A
Sequence ID:NM_001099644
Entrez Gene ID:15561
Ensembl ID:ENSMUSG00000032269

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A5.3|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 48899667 - 48910976

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053347Full LengthBC1447995-hydroxytryptamine (serotonin) receptor 3A
40131046Full LengthBC1457435-hydroxytryptamine (serotonin) receptor 3A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038589  

Protein Infomation

NM_001099644 NP_001093114    
NM_013561 NP_038589 P23979 Neur_chan_LBD

Related Sequences

M74425 AAA37124 P23979
BC144799 AAI44800 B7ZMU3
BC145743 AAI45744 Q8K1F4
AF513221 AAM47014 Q8K1F4
AY605711 AAT37716 Q6J1J7
X72395 CAA51089 P23979

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Htr3a NP_038589 R.norvegicus Htr3a 79246   NP_077370 95
H.sapiens HTR3A 3359 Gene Info NP_998786 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)