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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mmp7, matrix metallopeptidase 7
Sequence ID:NM_010810
Entrez Gene ID:17393
Ensembl ID:ENSMUSG00000018623

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A1|9 1.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 7692093 - 7699580

NM_010810 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
113276921107692241
13335976951557695381
36050876954677695615
50963776960467696174
63879976975877697748
80087876993377699415

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8733806Full LengthBC119057matrix metallopeptidase 7
40129578Full LengthBC120655matrix metallopeptidase 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034940  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010810 NP_034940   Peptidase_M10
PG_binding_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L36244 AAA99983 Q10738 EC 3.4.24.23
BC119057 AAI19058 Q3UN27  
BC120655 AAI20656 Q3UN27  
AY622968 AAT46399 Q6GXA3  
AK144515 BAE25921 Q3UN27  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mmp7 NP_034940 R.norvegicus Mmp7 25335   NP_036996 88
H.sapiens MMP7 4316 Gene Info NP_002414 71
A.thaliana AT4G16640 827365   NP_193397 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)