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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc44a1, solute carrier family 44, member 1
Sequence ID:NM_001159633
NM_133891
Entrez Gene ID:100434
Ensembl ID:ENSMUSG00000028412

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 B2|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 53562982 - 53564697

 Exon Info From UCSC:
NM_001159633
NM_133891

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40059854Full LengthBC113167solute carrier family 44, member 1
40059860Full LengthBC113169solute carrier family 44, member 1
3710331IncompleteBC010258solute carrier family 44, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598652  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159633 NP_001153105    
NM_133891 NP_598652 Q6X893 DUF580

Related Sequences

 
mRNAGenPeptSwissProt
BC010258 AAH10258 Q6X893
BC025941 AAH25941 Q6X893
BC113167 AAI13168 Q6X893
BC113169 AAI13170 Q6X893
AY249865 AAP81042 Q6X893
AY249866 AAP81043 Q6X893
AK141895 BAE24875 Q3UR13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc44a1 NP_598652 R.norvegicus Slc44a1 85254   NP_001029024 99
H.sapiens SLC44A1 23446 Gene Info NP_536856 96
A.gambiae CTLH1_ANOGA 1276904   XP_316311 40
D.melanogaster CG1311 38523   NP_647884 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)