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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hoxd4, homeobox D4
Sequence ID:NM_010469
Entrez Gene ID:15436
Ensembl ID:ENSMUSG00000042464

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 D|2 45.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 74727254 - 74729093

NM_010469 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12007456003474560233
2012797456060974560687
2803157456138874561423
3168317456351974564034
83216617456493274565761
166225597456631874567215

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862228Full LengthBC139206homeo box D4
8862229Full LengthBC139207homeo box D4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034599  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010469 NP_034599 P10628 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
J03770 AAA20072 P10628
BC139206 AAI39207 B9EI59
BC139207 AAI39208 B9EI59
AK135479 BAE22547 P10628

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hoxd4 NP_034599 R.norvegicus Hoxd4 288153   NP_001099355 98
H.sapiens HOXD4 3233 Gene Info NP_055436 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)