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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ldlrap1, low density lipoprotein receptor adaptor protein 1
Sequence ID:NM_145554
Entrez Gene ID:100017
Ensembl ID:ENSMUSG00000037295

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 134744734 - 134767965

NM_145554 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11788134301326134303113
17891823134304196134304230
18241954134305251134305381
19552038134305873134305956
20392111134306296134306368
21122226134311107134311221
22272339134313255134313367
23402482134314833134314975
24832671134323730134323918

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5067154Full LengthBC021467low density lipoprotein receptor adaptor protein 1
30055031Full LengthBC066808low density lipoprotein receptor adaptor protein 1
30092248Full LengthBC067411low density lipoprotein receptor adaptor protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_663529  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145554 NP_663529 Q8C142 PID

Related Sequences

 
mRNAGenPeptSwissProt
BC021467 AAH21467 Q8C142
BC066808 AAH66808 Q8C142
BC067411 AAH67411 Q8C142
AK029008 BAC26238 Q8C142
AK148340 BAE28493 Q8C142
AK159800 BAE35380 Q8C142
AK167290 BAE39396 Q8C142
AK169675 BAE41296 Q3TEF2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ldlrap1 NP_663529 R.norvegicus Ldlrap1 500564   NP_001102741 97
H.sapiens LDLRAP1 26119 Gene Info NP_056442 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)