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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tap1, transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Sequence ID:NM_001161730
NM_013683
Entrez Gene ID:21354
Ensembl ID:ENSMUSG00000037321

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17 18.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 34187727 - 34192276

 Exon Info From UCSC:
NM_001161730
NM_013683

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3257566Full LengthBC013802transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
3257734Full LengthBC024897transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038711  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001161730 NP_001155202    
NM_013683 NP_038711 Q3U543
P21958
ABC_tran
ABC_membrane

Related Sequences

 
mRNAGenPeptSwissProt
M55637 AAA39570 Q5D0F3
P21958
U60018 AAB41962 Q3U543
P21958
U60019 AAB41963 P21958
U60020 AAB41964 Q78E61
U60021 AAB41965 Q62428
U60022 AAB41966 Q62429
U60023 AAB41967 Q78E61
BC013802 AAH13802 Q5D0F3
BC024897 AAH24897 Q5D0F3
AK152953 BAE31620 Q3U6V4
AK153890 BAE32237 Q3U543
P21958
AK162731 BAE37041 P21958
AK171363 BAE42411 Q3TBA3
X59615 CAA42178 P21958

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tap1 NP_038711 R.norvegicus Tap1 24811   NP_114444 89
H.sapiens TAP1 6890 Gene Info NP_000584 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)