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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Msx3, homeobox, msh-like 3
Sequence ID:NM_010836
Entrez Gene ID:17703
Ensembl ID:ENSMUSG00000025469

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F4|7 68.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 140047741 - 140048999

NM_010836 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11984147232055147234038
19852287147234684147234986

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860596Full LengthBC137577homeobox, msh-like 3
8860597Full LengthBC137578homeobox, msh-like 3
6403259IncompleteBC051983homeobox, msh-like 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034966  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010836 NP_034966 P70354 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
U62523 AAB49935 P70354
BC051983 AAH51983 P70354
BC137577 AAI37578 B2RPS3
BC137578 AAI37579 B2RPS3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Msx3 NP_034966 R.norvegicus Msx3 114504   XP_001058715 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)