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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccna1, cyclin A1
Sequence ID:NM_007628
Entrez Gene ID:12427
Ensembl ID:ENSMUSG00000027793

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 C|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 55045476 - 55055042

NM_007628 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
162555484939054849629
2563895484988854850021
3905035485113054851243
5047085485232954852533
7099325485359954853822
93310575485446754854591
105813045485477054855016
130514905485825454858439
149115815485888654858976

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129441Full LengthBC120518cyclin A1
40129951Full LengthBC125436cyclin A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031654  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007628 NP_031654 Q61456 Cyclin_N
Cyclin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC120518 AAI20519 Q61456
BC125436 AAI25437 Q61456
AK077114 BAC36619 Q61456
X84311 CAA59053 Q61456

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccna1 NP_031654 R.norvegicus Ccna1 295052   NP_001011949 96
H.sapiens CCNA1 8900 Gene Info NP_003905 84
A.thaliana CYCA1;2 844075   NP_177863 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta