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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hesx1, homeobox gene expressed in ES cells
Sequence ID:NM_010420
Entrez Gene ID:15209
Ensembl ID:ENSMUSG00000040726

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14|14 A3-B

Chromosomal Position (from UCSC)

Chromosomal Position:14: 27000714 - 27002321

NM_010420 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15152781354727814061
5167152781455727814756
7168172781500427815105
81811352781519127815508

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053815Full LengthBC145262homeo box gene expressed in ES cells
40130328Full LengthBC132051homeo box gene expressed in ES cells
40130330Full LengthBC132053homeo box gene expressed in ES cells

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034550  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010420 NP_034550 Q61658 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
U40720 AAA97869 Q61658
BC132051 AAI32052 Q61658
BC132053 AAI32054 Q61658
BC145262 AAI45263 Q61658
AK082831 BAC38643 Q61658
X80040 CAA56344 Q61658

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hesx1 NP_034550 R.norvegicus Hesx1 498575   NP_001102576 94
H.sapiens HESX1 8820 Gene Info NP_003856 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)