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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Cltc, Clathrin, heavy polypeptide (Hc)
Sequence ID:NM_001003908
Entrez Gene ID:67300
Ensembl ID:ENSMUSG00000047126

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 86694355 - 86695146

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30546407Full LengthBC079897clathrin, heavy polypeptide (Hc)
4949242IncompleteBC031408clathrin, heavy polypeptide (Hc)
5369419IncompleteBC035544clathrin, heavy polypeptide (Hc)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001003908  

Protein Infomation

NM_001003908 NP_001003908 Q68FD5 Clathrin

Related Sequences

BC031408 AAH31408 Q8K2I5
BC079897 AAH79897 Q68FD5
AK122193 BAC65475 Q80U89
AK143503 BAE25402 Q3UPJ3
AK156869 BAE33881 Q3U0H2
AK158438 BAE34510 Q3TYQ2
AK167527 BAE39597 Q3TJ98
AK171732 BAE42637 Q3TAN1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Cltc NP_001003908 R.norvegicus Cltc 54241   NP_062172 100
H.sapiens CLTC 1213 Gene Info NP_004850 100
A.gambiae AgaP_AGAP003021 1272931   XP_311856 81
D.melanogaster Chc 32537   NP_001096993 80
C.elegans chc-1 176434   NP_499260 72
A.thaliana AT3G08530 820001   NP_187466 57
A.thaliana AT3G11130 820284   NP_187724 57
N.crassa NCU02510 3881791   XP_965641 57
S.pombe chc1 2542078   NP_594148 56
S.cerevisiae CHC1 852666   NP_011309 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)