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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ptplad1, protein tyrosine phosphatase-like A domain containing 1
Sequence ID:NM_021345
Entrez Gene ID:57874
Ensembl ID:ENSMUSG00000033629

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 D

Chromosomal Position (from UCSC)

Chromosomal Position:9: 64986985 - 65021710

 Exon Info From UCSC:
NM_021345

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4488391Full LengthBC031755protein tyrosine phosphatase-like A domain containing 1
6813640Full LengthBC057023protein tyrosine phosphatase-like A domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067320  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_021345 NP_067320 Q8K2C9 EC 4.2.1.134 PTPLA
CS

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC031755 AAH31755 Q8K2C9 EC 4.2.1.134
BC057023 AAH57023 Q8K2C9 EC 4.2.1.134
AK051735 BAC34744 Q8K2C9 EC 4.2.1.134
AK052865 BAC35179 Q8K2C9 EC 4.2.1.134
AK050556 BAE20677 Q8K2C9 EC 4.2.1.134
AK159494 BAE35128 Q8K2C9 EC 4.2.1.134
Z97207 CAB10097 Q8K2C9 EC 4.2.1.134

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptplad1 NP_067320 R.norvegicus RGD1565496 300783   NP_001100301 98
H.sapiens PTPLAD1 51495 Gene Info NP_057479 91
D.melanogaster CG9267 34762   NP_609655 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)