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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Dctn5, dynactin 5
Sequence ID:NM_021608
Entrez Gene ID:59288
Ensembl ID:ENSMUSG00000030868

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7|7 F3

Chromosomal Position (from UCSC)

Chromosomal Position:7: 122133082 - 122148638

NM_021608 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1141129276554129276694
142210129277682129277750
211329129278565129278683
330441129281761129281872
442544129287298129287400
5451532129291570129292557

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3153175Full LengthBC005671dynactin 5
4235312Full LengthBC010834dynactin 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067621  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021608 NP_067621 Q9QZB9 Hexapep

Related Sequences

 
mRNAGenPeptSwissProt
AF190795 AAF05615 Q9QZB9
BC005671 AAH05671 Q9QZB9
BC010834 AAH10834 Q9QZB9
AK010238 BAB26789 Q9QZB9
AK051957 BAC34820 Q9QZB9
AK076100 BAC36183 Q9QZB9
AK076738 BAC36460 Q9QZB9
AK146123 BAE26917 Q3UK85
AK151193 BAE30190 Q9QZB9
AK151876 BAE30763 Q9QZB9
AK168983 BAE40783 Q9QZB9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Dctn5 NP_067621 R.norvegicus Dctn5 308961   NP_001032867 100
H.sapiens DCTN5 84516 Gene Info NP_115875 99
D.melanogaster dyn-p25 34873   NP_723893 60
N.crassa NCU07196 3873564   XP_957421 48
C.elegans Y71F9AL.14 171856   NP_491065 45
P.falciparum PF07_0098 2655142   XP_001349136 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)