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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. C1ql3, C1q-like 3
Sequence ID:NM_153155
Entrez Gene ID:227580
Ensembl ID:ENSMUSG00000049630

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 A1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 13003456 - 13011747

NM_153155 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
125581292351312926070
255931631293188612932490

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4240136Full LengthBC024634C1q-like 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_694795  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153155 NP_694795 Q9ESN4 C1q
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
BC024634 AAH24634 Q9ESN4
EU399230 ABY86415 B0LXL6
AB044560 BAB15806 Q9ESN4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus C1ql3 NP_694795 H.sapiens C1QL3 389941 Gene Info NP_001010908 100
R.norvegicus C1ql3 680404   NP_001102873 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)