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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mrps25, mitochondrial ribosomal protein S25
Sequence ID:NM_025578
Entrez Gene ID:64658
Ensembl ID:ENSMUSG00000014551

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6|6 D3

Chromosomal Position (from UCSC)

Chromosomal Position:6: 92174837 - 92184000

NM_025578 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1256979211951692125201
569857859212570292125789
578658929212870392128809
589360769213383392134016

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5126320Full LengthBC022953mitochondrial ribosomal protein S25

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079854  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025578 NP_079854 Q9D125 L51_S25_CI-B8

Related Sequences

 
mRNAGenPeptSwissProt
BC022953 AAH22953 Q9D125
AK004037 BAB23136 Q9D125
AK013196 BAB28705 Q9D125
AK131114 BAD21364 Q6KAU3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mrps25 NP_079854 R.norvegicus Mrps25 297459   NP_001020579 95
H.sapiens MRPS25 64432 Gene Info NP_071942 91
A.gambiae AgaP_AGAP012136 1280541   XP_320391 57
D.melanogaster mRpS25 32395   NP_511153 55
C.elegans Y55F3AM.1 176926   NP_500032 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)