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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Dnaaf1, dynein, axonemal assembly factor 1
Sequence ID:NM_026648
Entrez Gene ID:68270
Ensembl ID:ENSMUSG00000031831

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 119591911 - 119597851

 Exon Info From UCSC:
NM_026648

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6774345Full LengthBC050751leucine rich repeat containing 50

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080924  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021441 NP_067416 Q6PDZ2  
NM_026648 NP_080924 Q9D2H9 LRR_1

Related Sequences

 
mRNAGenPeptSwissProt
BC050751 AAH50751 Q9D2H9
BC058383 AAH58383 Q6PDZ2
AK006656 BAB24692 Q9D2H9
AK019633 BAB31818 Q9D2H9
AK087534 BAC39916 Q6PDZ2
AK154846 BAE32872 Q6PDZ2
AK156718 BAE33818 Q3U0N4
Y09974 CAA71093 Q6PDZ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrrc50 NP_080924 R.norvegicus Dnaaf1 361419   NP_001014176 86
H.sapiens DNAAF1 123872 Gene Info NP_848547 62
P.falciparum MAL13P1.238 813797   XP_001350191 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)