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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tnfrsf1a, Tumor necrosis factor receptor superfamily, member 1a
Sequence ID:GH455087
Entrez Gene ID:21937
Ensembl ID:ENSMUSG00000030341

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F3|6 60.55

Chromosomal Position (from UCSC)

Chromosomal Position:6: 125361986 - 125362162


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3585060Full LengthBC004599tumor necrosis factor receptor superfamily, member 1a
30061894Full LengthBC052675tumor necrosis factor receptor superfamily, member 1a
5033693IncompleteBC096429tumor necrosis factor receptor superfamily, member 1a

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011609 NP_035739 Q3U479
P25118
TNFR_c6
Death

Related Sequences

 
mRNAGenPeptSwissProt
M60468 AAA39751 Q3U479
P25118
M59377 AAA40464 Q3U479
P25118
L26349 AAA59361 Q3U479
P25118
BC004599 AAH04599 Q3U479
P25118
BC052675 AAH52675 Q3U479
P25118
BC096429 AAH96429 Q4VAE0
AY541589 AAS48428 Q6QHF1
AY541590 AAS48429 Q6QHF0
AK154388 BAE32554 Q3U479
P25118
AK159989 BAE35539 Q3TVS9
X57796 CAA40936 Q3U479
P25118
X59238 CAA41922 Q3U479
P25118

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tnfrsf1a NP_035739 R.norvegicus Tnfrsf1a 25625   NP_037223 84
H.sapiens TNFRSF1A 7132 Gene Info NP_001056 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta