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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ccdc39, coiled-coil domain containing 39
Sequence ID:NM_026222
Entrez Gene ID:51938
Ensembl ID:ENSMUSG00000027676

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 A3|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 33812580 - 33814679

 Exon Info From UCSC:
NM_026222

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861939Full LengthBC138917coiled-coil domain containing 39
8861942Full LengthBC138920coiled-coil domain containing 39
100062264Full LengthBC156763coiled-coil domain containing 39
100016205BC152928coiled-coil domain containing 39

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026222 NP_080498 Q9D5Y1  

Related Sequences

 
mRNAGenPeptSwissProt
BC138917 AAI38918 Q9D5Y1
BC138920 AAI38921 Q9D5Y1
BC152928 AAI52929  
BC156763 AAI56764  
AK014839 BAB29574 Q9D5Y1
AK007153 BAC25166 Q8CF19
AK030087 BAC26777 Q9D5Y1
AK162849 BAE37082 Q3TQ36
AK163953 BAE37549 Q3TQ36

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccdc39 NP_080498 R.norvegicus Ccdc39 310315   NP_001101137 89
H.sapiens CCDC39 339829 Gene Info NP_852091 76
D.melanogaster CG17387 40595   NP_649495 24
A.gambiae AgaP_AGAP001293 1281884   XP_321854 23
P.falciparum MAL8P1.12 2655240   XP_001349239 19

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)