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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cntnap1, contactin associated protein-like 1
Sequence ID:NM_016782
Entrez Gene ID:53321
Ensembl ID:ENSMUSG00000017167

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 101176116 - 101189847

 Exon Info From UCSC:
NM_016782

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063633Full LengthBC156962contactin associated protein-like 1
100062336BC156099contactin associated protein-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058062  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016782 NP_058062 O54991 EGF
F5_F8_type_C
Laminin_G_2

Related Sequences

 
mRNAGenPeptSwissProt
AF039833 AAB96760 O54991
BC156099 AAI56100  
BC156962 AAI56963 O54991
AK154468 BAE32607 Q3U428

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cntnap1 NP_058062 R.norvegicus Cntnap1 84008   NP_114450 98
H.sapiens CNTNAP1 8506 Gene Info NP_003623 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)