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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atl1, atlastin GTPase 1
Sequence ID:NM_178628
Entrez Gene ID:73991
Ensembl ID:ENSMUSG00000021066

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 C2|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 69946176 - 69963560

 Exon Info From UCSC:
NM_178628

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5689726Full LengthBC057068atlastin GTPase 1
6595181Full LengthBC050784atlastin GTPase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848743  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178628 NP_848743 Q8BH66 GBP

Related Sequences

 
mRNAGenPeptSwissProt
BC050784 AAH50784 Q8BH66
BC057068 AAH57068 Q6PGE9
AK046919 BAC32920 Q8BH66
AK050339 BAC34198 Q8BH66
AK083918 BAC39062 Q8BH66

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atl1 NP_848743 R.norvegicus Atl1 362750   NP_001009831 99
H.sapiens ATL1 51062 Gene Info NP_056999 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)