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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rnf2, ring finger protein 2
Sequence ID:NM_011277
Entrez Gene ID:19821
Ensembl ID:ENSMUSG00000026484

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 G2|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 151469405 - 151500823

NM_011277 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12012153316535153318546
20132184153318767153318938
21852457153320201153320473
24582673153323269153323484
26742834153324001153324161
28352923153325666153325754
29243028153347848153347952

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4021046Full LengthBC020122ring finger protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035407  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011277 NP_035407 Q9CQJ4 zf-C3HC4

Related Sequences

 
mRNAGenPeptSwissProt
BC020122 AAH20122 Q9CQJ4
AK012358 BAB28186 Q9CQJ4
AK013124 BAB28663 Q9CQJ4
AK030319 BAC26898 Q9CQJ4
AK090066 BAC41075 Q9CQJ4
AK145767 BAE26638 Q9CQJ4
Y12783 CAA73321 Q9CQJ4
Y12880 CAA73380 Q9CQJ4
CT010297 CAJ18505 Q9CQJ4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rnf2 NP_035407 H.sapiens RNF2 6045 Gene Info NP_009143 100
R.norvegicus Rnf2 304850   NP_001020838 100
D.melanogaster Sce 43327   NP_477509 61
A.gambiae AgaP_AGAP002073 1281040   XP_320974 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)