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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Clec4a2, C-type lectin domain family 4, member a2
Sequence ID:NM_001170332
NM_001170333
NM_011999
Entrez Gene ID:26888
Ensembl ID:ENSMUSG00000030148

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F3|6 54.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 123123315 - 123142515

 Exon Info From UCSC:
NM_001170332
NM_001170333
NM_011999

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
874396Full LengthBC096565C-type lectin domain family 4, member a2
3968187Full LengthBC006623C-type lectin domain family 4, member a2
30287332Full LengthBC075729C-type lectin domain family 4, member a2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036129  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001170332 NP_001163803    
NM_001170333 NP_001163804    
NM_011999 NP_036129 Q9QZ15 Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC006623 AAH06623 Q923C7
BC075729 AAH75729 Q9QZ15
BC096565 AAH96565 Q9QZ15
AF387099 AAM22402 Q9QZ15
AK020363 BAC25626 Q8C1G3
AK049002 BAC33509 Q9QZ15
AJ133533 CAB57870 Q9QZ15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clec4a2 NP_001163803 M.musculus Clec4a4 474145 Gene Info NP_001005860 74
R.norvegicus Clecsf6 474143   NP_001005899 74
H.sapiens CLEC4A 50856 Gene Info NP_057268 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)