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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Mrpl48, mitochondrial ribosomal protein L48
Sequence ID:XM_003946242
XM_003946243
XM_003946244
NM_198831
NR_003559
Entrez Gene ID:52443
Ensembl ID:ENSMUSG00000030706

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 E1|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 100565193 - 100583090

NM_198831 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
22287107697630107697895
288377107699053107699142
378480107701092107701194
481650107708261107708430
651736107713707107713792
737774107719765107719802
775827107722975107723027
828968107731503107731643

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4168034Full LengthBC037190mitochondrial ribosomal protein L48
40099962Full LengthBC116358mitochondrial ribosomal protein L48
40099963Full LengthBC116359mitochondrial ribosomal protein L48
40099964Full LengthBC128487mitochondrial ribosomal protein L48
40099965Full LengthBC128488mitochondrial ribosomal protein L48
963472IncompleteBC096562mitochondrial ribosomal protein L48

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_198831 NP_942128    

Related Sequences

 
mRNAGenPeptSwissProt
BC037190 AAH37190 Q8JZS9
BC096562 AAH96562 Q8JZS9
BC116358 AAI16359 A2VCS1
BC116359 AAI16360 A2VCS1
BC128487 AAI28488 A2VCS1
BC128488 AAI28489 A2VCS1
AK171917 BAE42732 Q8JZS9
XM_003946242 XP_003946291  
XM_003946243 XP_003946292  
XM_003946244 XP_003946293  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mrpl48 NP_942128 R.norvegicus Mrpl48 293149   NP_001099752 93
H.sapiens MRPL48 51642 Gene Info NP_057139 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)