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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cdkn2a, cyclin-dependent kinase inhibitor 2A
Sequence ID:NM_001040654
NM_009877
Entrez Gene ID:12578
Ensembl ID:ENSMUSG00000044303

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C3-C6|4 42.7 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 89276667 - 89294523

 Exon Info From UCSC:
NM_001040654
NM_009877

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5342027Full LengthBC058190cyclin-dependent kinase inhibitor 2A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034007  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001040654 NP_001035744 P51480  
NM_009877 NP_034007 Q64364 P19Arf_N

Related Sequences

 
mRNAGenPeptSwissProt
L76150 AAA85453 P51480
S80650 AAB35770 Q64364
AF044335 AAC08962 P51480
AF044336 AAC08963 P51480
L76092 AAC42080 Q64364
BC058190 AAH58190 Q64364
EU071702 ABS85193 A7LP29
AK155307 BAE33180 P51480

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdkn2a NP_001035744 R.norvegicus Cdkn2a 25163   NP_113738 82
H.sapiens CDKN2A 1029 Gene Info NP_000068 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta