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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pard6a, par-6 (partitioning defective 6,) homolog alpha (C. elegans)
Sequence ID:NM_001047435
NM_001047436
NM_019695
Entrez Gene ID:56513
Ensembl ID:ENSMUSG00000005699

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8 D2

Chromosomal Position (from UCSC)

Chromosomal Position:8: 105701682 - 105703466

 Exon Info From UCSC:
NM_001047435
NM_001047436
NM_019695

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6535523Full LengthBC061114par-6 (partitioning defective 6,) homolog alpha (C. elegans)
6771847Full LengthBC049593par-6 (partitioning defective 6,) homolog alpha (C. elegans)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062669  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001047435 NP_001040900    
NM_001047436 NP_001040901    
NM_019695 NP_062669 Q9Z101 PB1
PDZ

Related Sequences

 
mRNAGenPeptSwissProt
AF070970 AAD15928 Q9Z101
BC049593 AAH49593 Q9Z101
Q3TY70
BC061114 AAH61114 Q9Z101
AK158848 BAE34693 Q3TY70

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pard6a NP_062669 R.norvegicus Pard6a 307799   NP_001003653 99
H.sapiens PARD6A 50855 Gene Info NP_058644 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)