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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bysl, bystin-like
Sequence ID:NM_016859
Entrez Gene ID:53414
Ensembl ID:ENSMUSG00000023988

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 C|17 22.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 47601552 - 47604371

NM_016859 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
125684773627947738846
256926714773934047739442
267228324773958647739746
283329664774080447740937
296731054774120347741341
310632684774378747743949
326938544774785547748440

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4925307Full LengthBC017530bystin-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058555  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016859 NP_058555 O54825
Q543N4
Bystin

Related Sequences

 
mRNAGenPeptSwissProt
AF007802 AAB94491 O54825
BC017530 AAH17530 O54825
Q543N4
AK019239 BAB31619 O54825
Q543N4
AK032993 BAC28118 O54825
Q543N4
AK049195 BAC33603 O54825
Q543N4
AK051704 BAC34727 O54825
Q543N4
AK083033 BAC38736 O54825
Q543N4
AK143027 BAE25255 O54825
AK168301 BAE40242 O54825

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bysl NP_058555 H.sapiens BYSL 705 Gene Info NP_004044 91
A.gambiae AgaP_AGAP002923 1273040   XP_311981 57
D.melanogaster bys 31701   NP_511074 54
C.elegans byn-1 175968   NP_498510 54
A.thaliana AT1G31660 840053   NP_174447 46
S.pombe SPBC13G1.09 2539887   NP_596559 46
S.cerevisiae ENP1 852549   NP_009806 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)