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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vil1, villin 1
Sequence ID:NM_009509
Entrez Gene ID:22349
Ensembl ID:ENSMUSG00000026175

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C5|1 40.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 74409387 - 74435515

 Exon Info From UCSC:
NM_009509

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4236751Full LengthBC015267villin 1
40095718Full LengthBC117875villin 1
40130974Full LengthBC145671villin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033535  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_009509 NP_033535 Q62468   Gelsolin
VHP
NM_176972 NP_795946 Q8C0R0 EC 3.4.19.12 UCH
UIM

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M98454 AAA40554 Q62468  
BC015267 AAH15267 Q62468  
BC117875 AAI17876 Q62468  
BC139091 AAI39092 Q8C0R0 EC 3.4.19.12
BC145671 AAI45672 Q62468  
AK027908 BAC25659 Q8CEJ4  
AK030013 BAC26734 Q8C0R0 EC 3.4.19.12
AK035640 BAC29135 Q8C0R0 EC 3.4.19.12
AK173210 BAD32488 Q8C0R0 EC 3.4.19.12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vil1 NP_033535 R.norvegicus Vil1 316521   NP_001101694 96
H.sapiens VIL1 7429 Gene Info NP_009058 90
A.thaliana AT5G57320 835837   NP_200542 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)