Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nid1, Nidogen 1
Sequence ID:NM_010917
Entrez Gene ID:18073
Ensembl ID:ENSMUSG00000005397

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A1|13 7.0

Chromosomal Position (from UCSC)

Chromosomal Position:13: 13437666 - 13500579

 Exon Info From UCSC:
NM_010917

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40110859Full LengthBC131669nidogen 1
30023373IncompleteBC052939nidogen 1
40110856IncompleteBC131668nidogen 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035047  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010917 NP_035047 P10493 EGF
Ldl_recept_b
Thyroglobulin_1
NIDO
G2F
EGF_CA

Related Sequences

 
mRNAGenPeptSwissProt
BC131669 AAI31670 P10493
AK041633 BAC31014 P10493
AK084876 BAC39300 P10493
AK144878 BAE26114 P10493
AK166779 BAE39014 P10493
X14194 CAA32408 P10493
X14480 CAA32642 P10493

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nid1 NP_035047 R.norvegicus Nid1 25494   XP_213954 95
H.sapiens NID1 4811 Gene Info NP_002499 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)