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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ccl11, Chemokine (C-C motif) ligand 11
Sequence ID:NM_011330
Entrez Gene ID:20292
Ensembl ID:ENSMUSG00000020676

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C|11 47.0

Chromosomal Position (from UCSC)

Chromosomal Position:11: 82057945 - 82062353

NM_011330 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12118187133381871543
2123238187518081875291
32410738187570781876456

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1527856Full LengthBC027521chemokine (C-C motif) ligand 11

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035460  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011330 NP_035460 P48298 IL8

Related Sequences

 
mRNAGenPeptSwissProt
U40672 AAA99776 P48298
U26426 AAC52256 P48298
AF128205 AAF22546 P48298
AF128206 AAF22547 P48298
AF128207 AAF22548 P48298
AF128208 AAF22549 P48298
AF128209 AAF22550 P48298
BC027521 AAH27521 P48298
AK010146 BAB26731 P48298

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ccl11 NP_035460 R.norvegicus Ccl11 29397   NP_062078 96
H.sapiens CCL11 6356 Gene Info NP_002977 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta