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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc7a2, solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
Sequence ID:NM_001044740
NM_007514
Entrez Gene ID:11988
Ensembl ID:ENSMUSG00000031596

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A4|8 21.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 40862395 - 40918056

 Exon Info From UCSC:
NM_001044740
NM_007514

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40111372Full LengthBC127082solute carrier family 7 (cationic amino acid transporter, y+ system), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031540  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001044740 NP_001038205    
NM_007514 NP_031540 P18581 AA_permease

Related Sequences

 
mRNAGenPeptSwissProt
L29006 AAA20397 P18581
L11600 AAA37350 P18581
L03290 AAA37372 P18581
M62838 AAA75250 P18581
BC127082 AAI27083 P18581
DQ086834 AAY87029 P18581
AK154621 BAE32720 P18581
AK171369 BAE42415 P18581

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc7a2 NP_001038205 R.norvegicus Slc7a2 64554   NP_001128158 97
H.sapiens SLC7A2 6542 Gene Info NP_001158243 91
D.melanogaster CG5535 39990   NP_649019 45
C.elegans B0454.6 173650   NP_494428 44
C.elegans C50D2.2 183650   NP_493662 43
C.elegans F23F1.6 184903   NP_493642 41
A.thaliana CAT4 821176   NP_187022 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)